| Alignment ID | Ingroup Tips | Ingroup Taxa | Dups | Incursions | Alignment Seqs | Alignment Length | Description |
| 256152 | 14 | 14 | 0 | 0 | 214 | 1945 | DNA-directed RNA polymerase, beta subunit [Desulfovibrio desulfuricans G20] |
| 258904 | 13 | 13 | 0 | 0 | 177 | 227 | ribosomal protein S4 [Lawsonia intracellularis PHE/MN1-00] |
| 245537 | 12 | 12 | 0 | 2 | 232 | 583 | GSU2603 ribosomal protein S1 [Geobacter sulfurreducens PCA] |
| 236398 | 12 | 12 | 0 | 0 | 102 | 511 | NusA antitermination factor [Geobacter metallireducens GS-15] |
| 200467 | 12 | 12 | 0 | 0 | 201 | 470 | sigma-54 (RpoN) [Anaeromyxobacter dehalogenans 2CP-C] |
| 242277 | 12 | 12 | 0 | 2 | 108 | 458 | phosphoglucosamine mutase [Helicobacter acinonychis str. Sheeba] |
| 241844 | 12 | 12 | 0 | 3 | 26 | 384 | GSU0812 nitrogen regulation protein NtrY, putative [Geobacter sulfurreducens PCA] |
| 240074 | 12 | 12 | 0 | 3 | 64 | 377 | conserved hypothetical membrane protein [Desulfotalea psychrophila LSv54] |
| 198336 | 12 | 12 | 0 | 0 | 117 | 336 | DNA-directed RNA polymerase, alpha subunit [Myxococcus xanthus DK 1622] |
| 256146 | 12 | 12 | 0 | 0 | 176 | 206 | NusG antitermination factor [Syntrophobacter fumaroxidans MPOB] |
| 257771 | 12 | 12 | 0 | 0 | 123 | 81 | GSU0422 flagellar motor switch protein FliN [Geobacter sulfurreducens PCA] |
| 175434 | 13 | 12 | 1 | 2 | 225 | 533 | related to lipoprotein releasing system transmembrane protein (LolC) [Desulfotalea psychrophila LSv54] |
| 193879 | 15 | 12 | 3 | 0 | 89 | 289 | RNA polymerase sigma factor RpoH [Anaeromyxobacter dehalogenans 2CP-C] |
| 215859 | 11 | 11 | 0 | 0 | 112 | 1991 | DNA-directed RNA polymerase, subunit beta-prime [Geobacter metallireducens GS-15] |
| 260059 | 11 | 11 | 0 | 0 | 206 | 1221 | leucyl-tRNA synthetase [Desulfovibrio desulfuricans G20] |
| 191147 | 11 | 11 | 0 | 3 | 141 | 745 | excinuclease ABC subunit B [Bdellovibrio bacteriovorus HD100] |
| 169944 | 11 | 11 | 0 | 2 | 28 | 659 | selenocysteine-specific translation elongation factor [Desulfovibrio desulfuricans G20] |
| 169638 | 11 | 11 | 0 | 0 | 175 | 601 | Molecular chaperone dnaK [Lawsonia intracellularis PHE/MN1-00] |
| 246815 | 11 | 11 | 0 | 1 | 44 | 544 | related to apolipoprotein N-acyltransferase [Desulfotalea psychrophila LSv54] |
| 198480 | 11 | 11 | 0 | 0 | 140 | 502 | gid protein [Anaeromyxobacter dehalogenans 2CP-C] |
| 258903 | 11 | 11 | 0 | 3 | 170 | 492 | preprotein translocase SecY subunit [Bdellovibrio bacteriovorus HD100] |
| 257765 | 11 | 11 | 0 | 3 | 174 | 443 | ATPase FliI/YscN [Geobacter metallireducens GS-15] |
| 247661 | 11 | 11 | 0 | 0 | 71 | 277 | Dihydrodipicolinate reductase [Lawsonia intracellularis PHE/MN1-00] |
| 241648 | 11 | 11 | 0 | 2 | 127 | 243 | ribosomal protein S3 [Syntrophobacter fumaroxidans MPOB] |
| 260228 | 11 | 11 | 0 | 0 | 188 | 240 | DVU1849 protein-L-isoaspartate O-methyltransferase [Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough] |
| 195743 | 11 | 11 | 0 | 0 | 164 | 197 | GSU0501 lipoprotein, putative [Geobacter sulfurreducens PCA] |
| 205412 | 11 | 11 | 0 | 2 | 181 | 150 | GatB/YqeY family protein [Desulfovibrio desulfuricans G20] |
| 170469 | 11 | 11 | 0 | 1 | 178 | 122 | dnaK suppressor protein [Aquifex aeolicus VF5] |
| 186258 | 12 | 11 | 1 | 0 | 163 | 337 | ribose-phosphate pyrophosphokinase [Pelobacter carbinolicus DSM 2380] |
| 174016 | 13 | 11 | 1 | 0 | 142 | 242 | hypothetical membrane protein [Syntrophus aciditrophicus SB] |
| 216679 | 14 | 11 | 2 | 1 | 78 | 386 | carboxyl-terminal protease family protein [Coxiella burnetii RSA 493] |
| 177706 | 16 | 11 | 3 | 0 | 158 | 549 | chaperonin GroEL [Syntrophus aciditrophicus SB] |
| 258566 | 10 | 10 | 0 | 0 | 189 | 1032 | probable alanyl-tRNA synthetase [Desulfotalea psychrophila LSv54] |
| 180550 | 10 | 10 | 0 | 2 | 12 | 784 | HDIG domain protein [Myxococcus xanthus DK 1622] |
| 218048 | 10 | 10 | 0 | 0 | 105 | 609 | RNA polymerase sigma factor RpoD [Myxococcus xanthus DK 1622] |
| 224149 | 10 | 10 | 0 | 0 | 103 | 397 | phenylalanyl-tRNA synthetase, alpha subunit [Syntrophobacter fumaroxidans MPOB] |
| 255550 | 10 | 10 | 0 | 0 | 183 | 362 | DNA-directed RNA polymerase, alpha subunit [Pelobacter propionicus DSM 2379] |
| 226123 | 10 | 10 | 0 | 1 | 33 | 343 | DVU0456 DHH family protein [Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough] |
| 206489 | 10 | 10 | 0 | 0 | 10 | 265 | organic solvent tolerance protein, putative [Desulfovibrio desulfuricans G20] |
| 258433 | 10 | 10 | 0 | 1 | 159 | 259 | Flagellar basal body L-ring protein [Lawsonia intracellularis PHE/MN1-00] |
| 232155 | 11 | 10 | 1 | 1 | 12 | 428 | conserved hypothetical protein [Bdellovibrio bacteriovorus HD100] |
| 204038 | 11 | 10 | 1 | 1 | 17 | 169 | conserved hypothetical protein [Syntrophobacter fumaroxidans MPOB] |