| Alignment ID | Ingroup Tips | Ingroup Taxa | Dups | Incursions | Alignment Seqs | Alignment Length | Description |
| 256152 | 97 | 97 | 0 | 0 | 214 | 1945 | RNA polymerase, beta subunit [Escherichia coli K12] |
| 257853 | 92 | 92 | 0 | 0 | 209 | 457 | synthesis of queuine in tRNA; probably S-adenosylmethionine:tRNA ribosyltransferase-isomerase; S-adenosylmethionine:tRNA (m6t6A37) ribosyltransferase-isomerase [Escherichia coli K12] |
| 256262 | 92 | 92 | 0 | 0 | 217 | 239 | 50S ribosomal subunit protein L3 [Escherichia coli K12] |
| 259258 | 92 | 92 | 0 | 0 | 92 | 200 | RNase T, degrades tRNA; RNase T, degrades tRNA, has exonuclease and ssDNAse activity [Escherichia coli K12] |
| 258833 | 92 | 92 | 0 | 1 | 189 | 92 | orf, hypothetical protein; conserved protein [Escherichia coli K12] |
| 256489 | 91 | 91 | 0 | 2 | 234 | 236 | undecaprenyl pyrophosphate synthetase (di-trans,poly-cis-decaprenylcistransferase) [Escherichia coli K12] |
| 256280 | 92 | 91 | 1 | 0 | 164 | 353 | RNA polymerase, alpha subunit [Escherichia coli K12] |
| 260231 | 92 | 91 | 1 | 0 | 190 | 302 | RNA polymerase, sigma(32) factor; regulation of proteins induced at high temperatures; sigma H (sigma 32) factor of RNA polymerase; transcription of heat shock and stress proteins [Escherichia coli K12] |
| 258193 | 90 | 90 | 0 | 0 | 90 | 758 | DNA topoisomerase IV subunit A; DNA topoisomerase IV, subunit A [Escherichia coli K12] |
| 257466 | 90 | 90 | 0 | 0 | 135 | 186 | DNA polymerase III, epsilon subunit; DNA polymerase III: epsilon subunit, 3-5 exonucleolytic proofreading function (N-terminal); alpha subunit binding domain (C-terminal) [Escherichia coli K12] |
| 256270 | 89 | 89 | 0 | 0 | 116 | 186 | 50S ribosomal subunit protein L4, regulates expression of S10 operon [Escherichia coli K12] |
| 256964 | 87 | 87 | 0 | 0 | 137 | 475 | adenylosuccinate lyase [Escherichia coli K12] |
| 257856 | 87 | 87 | 0 | 0 | 246 | 242 | RNase PH [Escherichia coli K12] |
| 255630 | 96 | 87 | 2 | 1 | 113 | 52 | carbon storage regulator; controls glycogen synthesis, gluconeogenesis, cell size and surface properties; carbon storage regulator, post-translational activator of flhDC expression, regulates biofilm formation, RNA-binding [Escherichia coli K12] |
| 258152 | 88 | 86 | 2 | 3 | 143 | 369 | phosphatidylglycerol-prolipoprotein diacylglyceryl transferase; a major membrane phospholipid; phosphatidylglycerol-prolipoprotein diacylglyceryl transferase [Escherichia coli K12] |
| 258346 | 85 | 85 | 0 | 0 | 118 | 680 | DNA topoisomerase IV subunit B; DNA topoisomerase IV, subunit B [Escherichia coli K12] |
| 253287 | 85 | 85 | 0 | 0 | 122 | 153 | putative invasion protein; nucleotide hydrolase, acts on adenosine(5')-pentaphospho-(5')-adenosine (Nudix family) [Escherichia coli K12] |
| 258903 | 84 | 84 | 0 | 0 | 170 | 492 | putative ATPase subunit of translocase; preprotein translocase, membrane component, transport across inner membrane (General Secretory Pathway) [Escherichia coli K12] |
| 258473 | 84 | 84 | 0 | 0 | 117 | 248 | orf, hypothetical protein; pseudouridine synthase (makes pseudouridine2605 in 23 S RNA) [Escherichia coli K12] |
| 257085 | 84 | 84 | 0 | 0 | 120 | 247 | putative ATP-binding component of a transport system; putative transport protein (ABC superfamily, atp_bind) [Escherichia coli K12] |
| 256820 | 84 | 84 | 0 | 0 | 180 | 139 | orf, hypothetical protein; conserved protein [Escherichia coli K12] |
| 255788 | 84 | 84 | 0 | 0 | 131 | 68 | host factor I for bacteriophage Q beta replication, a growth-related protein; host factor I for bacteriophage Q beta replication, plays a role in degradation of RNA transcripts [Escherichia coli K12] |
| 257418 | 83 | 83 | 0 | 0 | 147 | 751 | chaperone Hsp90, heat shock protein C 62.5 [Escherichia coli K12] |
| 256690 | 83 | 83 | 0 | 0 | 250 | 546 | heat shock protein hslVU, ATPase subunit, homologous to chaperones; ATPase component of the HslUV protease, also functions as molecular chaperone [Escherichia coli K12] |
| 257348 | 83 | 83 | 0 | 1 | 137 | 357 | coproporphyrinogen III oxidase [Escherichia coli K12] |
| 257156 | 83 | 83 | 0 | 1 | 119 | 285 | 4-hydroxybenzoate-octaprenyltransferase; p-hydroxybenzoate octaprenyltransferase [Escherichia coli K12] |
| 258053 | 83 | 83 | 0 | 0 | 167 | 156 | transcription elongation factor: cleaves 3' nucleotide of paused mRNA; transcription elongation factor, cleaves 3' nucleotide of paused mRNA [Escherichia coli K12] |
| 258197 | 83 | 83 | 0 | 0 | 108 | 155 | membrane-bound ATP synthase, F0 sector, subunit b [Escherichia coli K12] |
| 258185 | 83 | 83 | 0 | 0 | 139 | 97 | integration host factor (IHF), beta subunit; site-specific recombination; integration host factor (IHF), beta subunit, site-specific recombination [Escherichia coli K12] |
| 257959 | 83 | 83 | 0 | 0 | 135 | 58 | 30S ribosomal subunit protein S21 [Escherichia coli K12] |
| 259302 | 82 | 82 | 0 | 0 | 175 | 545 | cell division protein; cell division protein, required for chromosome partitioning [Escherichia coli K12] |
| 254795 | 82 | 82 | 0 | 0 | 111 | 211 | regulator of transcription; stringent starvation protein A; stringent starvation protein A, regulator of transcription [Escherichia coli K12] |
| 195743 | 82 | 82 | 0 | 0 | 164 | 197 | orf, hypothetical protein; putative lipoprotein [Escherichia coli K12] |
| 257236 | 81 | 81 | 0 | 0 | 160 | 479 | suppresses inhibitory activity of CsrA [Escherichia coli K12] |
| 237389 | 81 | 81 | 0 | 0 | 104 | 403 | RNA polymerase, sigma(70) factor; regulation of proteins induced at high temperatures; sigma D (sigma 70) factor of RNA polymerase [Escherichia coli K12] |
| 257169 | 81 | 81 | 0 | 0 | 109 | 157 | shikimate kinase I [Escherichia coli K12] |
| 206110 | 80 | 80 | 0 | 0 | 146 | 622 | protein chain initiation factor IF-2 [Escherichia coli K12] |
| 206869 | 80 | 80 | 0 | 0 | 163 | 530 | periplasmic protein involved in the tonb-independent uptake of group A colicins; required for outer membrane integrity, uptake of group A colicins, and translocation of phage DNA [Escherichia coli K12] |
| 259250 | 80 | 80 | 0 | 0 | 120 | 256 | 2-octaprenyl-6-methoxy-1,4-benzoquinone --> 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinone; S-adenosylmethionine:2-DMK methyltransferase; 2-octaprenyl-6-methoxy-1,4-benzoquinone methylase [Escherichia coli K12] |
| 258429 | 80 | 80 | 0 | 0 | 110 | 248 | orotate phosphoribosyltransferase [Escherichia coli K12] |
| 258677 | 80 | 80 | 0 | 0 | 110 | 201 | phosphatidylglycerophosphate synthetase = CDP-1,2-diacyl-sn-glycero-3-phosphate phosphatidyl transferase; phosphatidylglycerophosphate synthetase (CDP-1,2-diacyl-sn-glycero-3-phosphate phosphatidyl transferase) [Escherichia coli K12] |
| 219846 | 84 | 80 | 1 | 0 | 154 | 174 | protein export; molecular chaperone; may bind to signel sequence; molecular chaperone in protein export, enhances activity of SecA (General Secretory Pathway) [Escherichia coli K12] |
| 258352 | 87 | 80 | 2 | 0 | 160 | 515 | replicative DNA helicase; part of primosome; replicative DNA helicase; chromosome replication; chain elongation [Escherichia coli K12] |
| 257058 | 79 | 79 | 0 | 0 | 248 | 250 | putative ATP-binding component of a transport system; putative transport protein (ABC superfamily, atp_bind) [Escherichia coli K12] |
| 258788 | 79 | 79 | 0 | 0 | 128 | 224 | 23 S rRNA methyltransferase [Escherichia coli K12] |
| 259274 | 79 | 79 | 0 | 2 | 93 | 117 | putative kinase; dihydroneopterin aldolase, also has dihydroneopterin triphosphate 2'-epimerase activity [Escherichia coli K12] |
| 168384 | 78 | 78 | 0 | 0 | 158 | 406 | 3-phosphoserine aminotransferase; 3-phosphoserine/phosphohydroxythreonine aminotransferase [Escherichia coli K12] |
| 258765 | 78 | 78 | 0 | 0 | 115 | 197 | peptidyl-tRNA hydrolase [Escherichia coli K12] |
| 215653 | 79 | 78 | 1 | 3 | 227 | 50 | orf, hypothetical protein; preprotein translocase, auxillary membrane component (General Secretory Pathway) [Escherichia coli K12] |
| 257002 | 77 | 77 | 0 | 0 | 176 | 893 | ATP-binding component of serine protease; ATP-dependent specificity subunit of clpA-clpP serine protease [Escherichia coli K12] |
| 203224 | 77 | 77 | 0 | 0 | 243 | 464 | ssDNA and dsDNA binding, ATP binding; gap repair protein [Escherichia coli K12] |
| 171358 | 77 | 77 | 0 | 0 | 198 | 420 | tetraacyldisaccharide-1-P; lipid A biosynthesis, penultimate step; tetraacyldisaccharide-1-P [Escherichia coli K12] |
| 255690 | 77 | 77 | 0 | 0 | 113 | 377 | UDP-3-O-(3-hydroxymyristoyl)-glucosamine N-acyltransferase [Escherichia coli K12] |
| 257231 | 77 | 77 | 0 | 0 | 123 | 319 | GTP-binding protein; GTPase believed to be involved in coordination of cell cycle, energy metabolism, cell division [Escherichia coli K12] |
| 260350 | 77 | 77 | 0 | 0 | 126 | 318 | membrane-bound ATP synthase, F1 sector, gamma-subunit [Escherichia coli K12] |
| 260767 | 77 | 77 | 0 | 1 | 127 | 260 | orf, hypothetical protein; putative methyltransferase [Escherichia coli K12] |
| 258578 | 77 | 77 | 0 | 0 | 102 | 218 | RNase III, ds RNA [Escherichia coli K12] |
| 235463 | 77 | 77 | 0 | 0 | 103 | 91 | stringent starvation protein B [Escherichia coli K12] |
| 258134 | 76 | 76 | 0 | 0 | 104 | 720 | rep helicase, a single-stranded DNA dependent ATPase; Rep helicase, a single-stranded DNA-dependent ATPase [Escherichia coli K12] |
| 258064 | 76 | 76 | 0 | 0 | 95 | 648 | excinuclease ABC, subunit C; repair of UV damage to DNA; DNA exisiton repair enzyme together with UvrAB [Escherichia coli K12] |
| 259076 | 76 | 76 | 0 | 0 | 220 | 357 | thioredoxin reductase; thioredoxin reductase, FAD/NAD(P)-binding [Escherichia coli K12] |
| 259209 | 76 | 76 | 0 | 0 | 118 | 314 | octaprenyl-diphosphate synthase [Escherichia coli K12] |
| 258309 | 76 | 76 | 0 | 0 | 170 | 239 | succinate dehydrogenase, iron sulfur protein; succinate dehydrogenase, Fe-S protein [Escherichia coli K12] |
| 260221 | 76 | 76 | 0 | 1 | 77 | 220 | thymidylate kinase [Escherichia coli K12] |
| 257589 | 76 | 76 | 0 | 1 | 114 | 210 | orf, hypothetical protein; conserved protein [Escherichia coli K12] |
| 165105 | 76 | 76 | 0 | 0 | 229 | 113 | ribosome-binding factor A; ribosome-binding factor, role in processing of 10S rRNA [Escherichia coli K12] |
| 258276 | 76 | 76 | 0 | 2 | 102 | 95 | 50S ribosomal subunit protein L23 [Escherichia coli K12] |
| 219853 | 76 | 76 | 0 | 3 | 144 | 67 | membrane-bound ATP synthase, F0 sector, subunit c [Escherichia coli K12] |
| 255559 | 77 | 76 | 1 | 0 | 226 | 320 | 7,8-dihydropteroate synthase [Escherichia coli K12] |
| 250889 | 81 | 76 | 2 | 0 | 168 | 96 | GroES, 10 Kd chaperone binds to Hsp60 in pres. Mg-ATP, suppressing its ATPase activity; chaperone Hsp10, affects cell division [Escherichia coli K12] |
| 258837 | 75 | 75 | 0 | 1 | 108 | 341 | membrane-bound ATP synthase, F0 sector, subunit a; membrane-bound ATP synthase, F0 sector, subunit a, important for FO assembly [Escherichia coli K12] |
| 256536 | 75 | 75 | 0 | 0 | 243 | 332 | phosphoribosylpyrophosphate synthetase [Escherichia coli K12] |
| 246568 | 75 | 75 | 0 | 0 | 75 | 201 | orf, hypothetical protein; membrane-bound protein in GNT I transport system [Escherichia coli K12] |
| 250857 | 75 | 75 | 0 | 3 | 78 | 138 | orf, hypothetical protein; conserved hypothetical protein [Escherichia coli K12] |
| 259159 | 75 | 75 | 0 | 0 | 93 | 128 | dnaK suppressor protein [Escherichia coli K12] |
| 257478 | 75 | 75 | 0 | 0 | 202 | 106 | 50S ribosomal subunit protein L24 [Escherichia coli K12] |
| 255953 | 75 | 75 | 0 | 2 | 77 | 84 | 30S ribosomal subunit protein S20 [Escherichia coli K12] |
| 257001 | 75 | 75 | 0 | 0 | 140 | 81 | orf, hypothetical protein; modulator of ClpA substrate specificity [Escherichia coli K12] |
| 260211 | 76 | 75 | 1 | 0 | 109 | 129 | negative regulator; transcriptional repressor of iron transport (Fur family) [Escherichia coli K12] |
| 258557 | 74 | 74 | 0 | 0 | 107 | 425 | maturation of antibiotic MccB17, see tld genes; peptide maturation protein, maturation of antibiotic MccB17 [Escherichia coli K12] |
| 169177 | 74 | 74 | 0 | 1 | 239 | 221 | putative protease; membrane-associated protease [Escherichia coli K12] |
| 258420 | 74 | 74 | 0 | 3 | 102 | 169 | orf, hypothetical protein; conserved protein [Escherichia coli K12] |
| 177740 | 74 | 74 | 0 | 0 | 134 | 140 | orf, hypothetical protein; conserved hypothetical protein [Escherichia coli K12] |
| 192389 | 74 | 74 | 0 | 1 | 113 | 134 | electron transport complex protein; putative iron-sulfur cluster-binding protein [Escherichia coli K12] |
| 259583 | 74 | 74 | 0 | 1 | 75 | 126 | Hsp15; DNA/RNA binding heat shock protein; heat shock protein 15, DNA/RNA-binding [Escherichia coli K12] |
| 253050 | 74 | 74 | 0 | 1 | 147 | 80 | 50S ribosomal subunit protein L28 [Escherichia coli K12] |
| 189497 | 80 | 74 | 2 | 0 | 107 | 72 | site-specific DNA inversion stimulation factor; DNA-binding protein; a trans activator for transcription; DNA-binding protein for site-specific recombination and inversion, transcription of rRNA and tRNA operons, and DNA replication [Escherichia coli K12] |
| 257359 | 73 | 73 | 0 | 0 | 117 | 271 | survival protein; survival protein, protein damage control [Escherichia coli K12] |
| 180839 | 73 | 73 | 0 | 0 | 235 | 205 | deoxyuridinetriphosphatase [Escherichia coli K12] |
| 258235 | 73 | 73 | 0 | 0 | 104 | 194 | GTPase essential for cell cycle; putative GTPase, involved in coordination of cell cycle [Escherichia coli K12] |
| 259832 | 73 | 73 | 0 | 0 | 151 | 109 | D-Tyr-tRNATyr deacyclase; D-Tyr-tRNA(Tyr) deacylase [Escherichia coli K12] |
| 260789 | 73 | 73 | 0 | 1 | 92 | 95 | orf, hypothetical protein; conserved hypothetical protein [Escherichia coli K12] |
| 257834 | 73 | 73 | 0 | 0 | 120 | 75 | orf, hypothetical protein; conserved hypothetical protein [Escherichia coli K12] |
| 260408 | 73 | 73 | 0 | 0 | 138 | 65 | 50S ribosomal subunit protein L31 [Escherichia coli K12] |
| 258784 | 75 | 73 | 1 | 0 | 169 | 156 | inorganic pyrophosphatase [Escherichia coli K12] |
| 167754 | 72 | 72 | 0 | 0 | 166 | 1069 | DNA gyrase subunit B, type II topoisomerase, ATPase activity; DNA gyrase, subunit B (type II topoisomerase) [Escherichia coli K12] |
| 258206 | 72 | 72 | 0 | 0 | 122 | 536 | GTPase involved in synthesis of hypermodified nucleoside, tRNA 5-methylaminomethyl-2-thiouridine; involved in thiophene and furan oxidation; GTPase involved in tRNA modification and in thiophene and furan oxidation [Escherichia coli K12] |
| 257229 | 72 | 72 | 0 | 0 | 248 | 422 | succinyl-CoA synthetase, beta subunit [Escherichia coli K12] |
| 257373 | 72 | 72 | 0 | 0 | 131 | 230 | ribosephosphate isomerase, constitutive [Escherichia coli K12] |
| 257562 | 72 | 72 | 0 | 0 | 108 | 228 | orotidine-5'-phosphate decarboxylase [Escherichia coli K12] |
| 161784 | 72 | 72 | 0 | 0 | 188 | 189 | methylase for 50S ribosomal subunit protein L11; methylation of 50S ribosomal subunit protein L11 [Escherichia coli K12] |
| 259021 | 72 | 72 | 0 | 0 | 72 | 160 | orf, hypothetical protein; conserved hypothetical protein [Escherichia coli K12] |
| 259341 | 72 | 72 | 0 | 0 | 243 | 142 | small protein B [Escherichia coli K12] |
| 255534 | 73 | 72 | 1 | 0 | 119 | 162 | transcription elongation factor and transcript cleavage [Escherichia coli K12] |
| 214186 | 90 | 72 | 1 | 0 | 162 | 420 | orf, hypothetical protein; putative ATPase [Escherichia coli K12] |
| 171065 | 71 | 71 | 0 | 0 | 148 | 1139 | adenylylating enzyme for glutamine synthetase; adenylyl transferase for glutamine synthetase, regulates P-II (GlnB) and GlnK [Escherichia coli K12] |
| 193671 | 71 | 71 | 0 | 1 | 118 | 858 | peptidoglycan synthetase; penicillin-binding protein 1B; bifunctional penicilling-binding protein 1b: glycosyl transferase (N-terminal); transpeptidase (C-terminal) [Escherichia coli K12] |
| 218895 | 71 | 71 | 0 | 2 | 226 | 621 | putative oxidoreductase; putative methyltransferase [Escherichia coli K12] |
| 258928 | 71 | 71 | 0 | 1 | 148 | 546 | putative 2,3-bisphosphoglycerate-independent phosphoglycerate mutase; phosphoglycerate mutase III, cofactor-independent [Escherichia coli K12] |
| 260334 | 71 | 71 | 0 | 0 | 85 | 528 | transport of potassium; potassium transport protein, NAD(P)-binding (Trk family) [Escherichia coli K12] |
| 253300 | 71 | 71 | 0 | 0 | 71 | 432 | orf, hypothetical protein; conserved protein [Escherichia coli K12] |
| 261173 | 71 | 71 | 0 | 0 | 118 | 355 | Ribosomal large subunit pseudouridine synthase C; 23S rRNA pseudouridylate synthase [Escherichia coli K12] |
| 257333 | 71 | 71 | 0 | 0 | 157 | 277 | UDP-N-acetylglucosamine acetyltransferase; lipid A biosynthesis; UDP-N-acetylglucosamine acetyltransferase [Escherichia coli K12] |
| 257095 | 71 | 71 | 0 | 0 | 102 | 216 | orf, hypothetical protein; putative transport protein (ABC superfamily, membrane) [Escherichia coli K12] |
| 257580 | 71 | 71 | 0 | 0 | 176 | 202 | putative ATP-binding protein in pho regulon; putative phosphate starvation-inducible protein, ATP-binding [Escherichia coli K12] |
| 258069 | 71 | 71 | 0 | 0 | 148 | 104 | 50S ribosomal subunit protein L21 [Escherichia coli K12] |
| 202603 | 72 | 71 | 1 | 0 | 174 | 680 | apolipoprotein N-acyltransferase, copper homeostasis protein, inner membrane [Escherichia coli K12] |
| 257927 | 70 | 70 | 0 | 1 | 124 | 518 | asparagine tRNA synthetase [Escherichia coli K12] |
| 167166 | 70 | 70 | 0 | 0 | 160 | 401 | protease specific for phage lambda cII repressor; with HflC, part of modulator for protease specific for FtsH phage lambda cII repressor [Escherichia coli K12] |
| 177699 | 70 | 70 | 0 | 2 | 217 | 354 | thiamin-monophosphate kinase [Escherichia coli K12] |
| 260809 | 70 | 70 | 0 | 2 | 72 | 340 | putative enzyme; putative methyltransferases [Escherichia coli K12] |
| 258366 | 70 | 70 | 0 | 1 | 106 | 299 | quinolinate phosphoribosyltransferase [Escherichia coli K12] |
| 259251 | 70 | 70 | 0 | 0 | 111 | 284 | S-adenosylmethionine-6-N',N'-adenosyl (rRNA) dimethyltransferase; S-adenosylmethionine-6-N',N'-adenosyl (rRNA) dimethyltransferase, kasugamycin resistance [Escherichia coli K12] |
| 258688 | 70 | 70 | 0 | 0 | 70 | 175 | orf, hypothetical protein; conserved protein, MutT-like [Escherichia coli K12] |
| 227582 | 70 | 70 | 0 | 1 | 101 | 161 | beta-hydroxydecanoyl thioester dehydrase, trans-2-decenoyl-ACP isomerase; beta-hydroxydecanoyl thioester dehydrase (trans-2-decenoyl-ACP isomerase) [Escherichia coli K12] |
| 260455 | 70 | 70 | 0 | 0 | 111 | 141 | Fe-S cluster-containing transcription factor; transcriptional repressor of iscRSUA operon [Escherichia coli K12] |
| 259335 | 70 | 70 | 0 | 0 | 70 | 119 | preprotein translocase; preprotein translocase, membrane component, transport across inner membrane (General Secretory Pathway) [Escherichia coli K12] |
| 209497 | 70 | 70 | 0 | 3 | 96 | 74 | orf, hypothetical protein; conserved hypothetical protein [Escherichia coli K12] |
| 175834 | 69 | 69 | 0 | 0 | 118 | 589 | UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase [Escherichia coli K12] |
| 250876 | 69 | 69 | 0 | 0 | 96 | 453 | N-acetylglutamate synthase; amino acid acetyltransferase; N-alpha-acetylglutamate synthase (amino acid acetyltransferase) [Escherichia coli K12] |
| 257932 | 69 | 69 | 0 | 0 | 226 | 411 | chorismate synthase [Escherichia coli K12] |
| 258844 | 69 | 69 | 0 | 0 | 106 | 370 | GTP - binding subunit of protease specific for phage lambda cII repressor; putative GTPase subunit of protease, together with HflC-HflK involved in stability of phage lambda cII repressor [Escherichia coli K12] |
| 258482 | 69 | 69 | 0 | 3 | 190 | 319 | biotin synthesis, sulfur insertion?; biotin synthetase [Escherichia coli K12] |
| 241672 | 69 | 69 | 0 | 0 | 223 | 298 | orf, hypothetical protein; conserved hypothetical protein [Escherichia coli K12] |
| 256313 | 69 | 69 | 0 | 0 | 132 | 261 | tRNA methyltransferase; tRNA (guanine-7-)-methyltransferase; tRNA (guanine-7-)-methyltransferase [Escherichia coli K12] |
| 258370 | 69 | 69 | 0 | 0 | 223 | 222 | p-aminobenzoate synthetase, component II; aminodeoxychorismate synthase subunit II, component of p-aminobenzoate synthase multienzyme complex [Escherichia coli K12] |
| 196594 | 69 | 69 | 0 | 1 | 70 | 214 | putative ligase [Escherichia coli K12] |
| 196461 | 69 | 69 | 0 | 3 | 119 | 151 | membrane protein required for colicin V production [Escherichia coli K12] |
| 231024 | 69 | 69 | 0 | 1 | 212 | 113 | orf, hypothetical protein; putative glycoprotein endopeptidase [Escherichia coli K12] |
| 255011 | 69 | 69 | 0 | 0 | 69 | 71 | small protein required for cell growth; affects RpoS stability; small ubiquitous RNA-binding protein required for normal growth, cytoplasmic [Escherichia coli K12] |
| 203124 | 70 | 69 | 1 | 0 | 81 | 221 | protein disulfide isomerase II; protein disulfide isomerase II, activated by N-terminal of DsbD [Escherichia coli K12] |
| 240989 | 71 | 69 | 2 | 0 | 150 | 524 | degrades sigma32, integral membrane peptidase, cell division protein; ATP-dependent zinc-metallo protease [Escherichia coli K12] |
| 168511 | 68 | 68 | 0 | 0 | 145 | 577 | GroEL, chaperone Hsp60, peptide-dependent ATPase, heat shock protein; chaperone Hsp60 with peptide-dependent ATPase activity, affects cell division [Escherichia coli K12] |
| 258119 | 68 | 68 | 0 | 0 | 134 | 548 | transcription pausing; L factor [Escherichia coli K12] |
| 200467 | 68 | 68 | 0 | 0 | 201 | 470 | RNA polymerase, sigma(54 or 60) factor; nitrogen and fermentation regulation; sigma N (sigma 54) factor of RNA polymerase [Escherichia coli K12] |
| 257365 | 68 | 68 | 0 | 0 | 99 | 257 | pseudouridylate synthase I [Escherichia coli K12] |
| 258439 | 68 | 68 | 0 | 0 | 189 | 249 | orf, hypothetical protein; conserved protein [Escherichia coli K12] |
| 253754 | 68 | 68 | 0 | 3 | 138 | 230 | leucyl, phenylalanyl-tRNA-protein transferase [Escherichia coli K12] |
| 191244 | 68 | 68 | 0 | 0 | 181 | 208 | 16S rRNA processing protein [Escherichia coli K12] |
| 257450 | 68 | 68 | 0 | 0 | 114 | 118 | orf, hypothetical protein; conserved hypothetical protein [Escherichia coli K12] |
| 242452 | 68 | 68 | 0 | 0 | 205 | 102 | membrane-bound ATP synthase, F1 sector, delta-subunit [Escherichia coli K12] |
| 256559 | 70 | 68 | 1 | 0 | 92 | 286 | formamidopyrimidine DNA glycosylase [Escherichia coli K12] |
| 213855 | 67 | 67 | 0 | 0 | 67 | 885 | glycerol-3-phosphate acyltransferase; glycerolphosphate acyltransferase [Escherichia coli K12] |
| 245537 | 67 | 67 | 0 | 0 | 232 | 583 | 30S ribosomal subunit protein S1 [Escherichia coli K12] |
| 258154 | 67 | 67 | 0 | 0 | 124 | 505 | N-acetyl glucosamine-1-phosphate uridyltransferase; bifunctional: N-acetyl glucosamine-1-phosphate uridyltransferase (N-terminal); glucosamine-1-phosphate acetyl transferase (C-terminal) [Escherichia coli K12] |
| 259153 | 67 | 67 | 0 | 0 | 107 | 495 | RNase E, membrane attachment, mRNA turnover, maturation 5S RNA; RNase E: endoribonuclease for rRNA processing and mRNA degradation [Escherichia coli K12] |
| 207336 | 67 | 67 | 0 | 0 | 110 | 429 | orf, hypothetical protein; putative transmembrane protein, transport [Escherichia coli K12] |
| 257865 | 67 | 67 | 0 | 0 | 134 | 383 | uroporphyrinogen decarboxylase [Escherichia coli K12] |
| 184640 | 67 | 67 | 0 | 2 | 155 | 313 | orf, hypothetical protein; putative aminomutase [Escherichia coli K12] |
| 257746 | 67 | 67 | 0 | 0 | 240 | 302 | methionine aminopeptidase [Escherichia coli K12] |
| 221125 | 67 | 67 | 0 | 1 | 143 | 276 | RNase D, processes tRNA precursor [Escherichia coli K12] |
| 200631 | 67 | 67 | 0 | 0 | 82 | 232 | putative DNA replication factor; regulatory factor involved in inactivation of DnaA [Escherichia coli K12] |
| 257218 | 67 | 67 | 0 | 1 | 230 | 151 | tRNA-specific adenosine deaminase [Escherichia coli K12] |
| 163070 | 67 | 67 | 0 | 0 | 87 | 151 | protease specific for phage lambda cII repressor; with HflK, part of modulator for protease specific for FtsH phage lambda cII repressor [Escherichia coli K12] |
| 204612 | 67 | 67 | 0 | 1 | 68 | 109 | RNase P, protein component; protein C5 [Escherichia coli K12] |
| 180616 | 68 | 67 | 1 | 0 | 240 | 571 | peptide chain release factor RF-3; peptide chain release factor RF-3; possible GTP-binding factor [Escherichia coli K12] |
| 170560 | 73 | 67 | 3 | 1 | 117 | 480 | outer membrane channel; specific tolerance to colicin E1; segregation of daughter chromosomes; outer membrane channel; tolerance to colicin E1, segregation of daughter chromosomes, role in organic solvent tolerance [Escherichia coli K12] |
| 200463 | 76 | 67 | 1 | 0 | 103 | 495 | protein secretion; membrane protein, part of the channel; preprotein translocase, auxillary membrane component (General Secretory Pathway) [Escherichia coli K12] |
| 258566 | 66 | 66 | 0 | 0 | 189 | 1032 | alanyl-tRNA synthetase [Escherichia coli K12] |
| 255682 | 66 | 66 | 0 | 0 | 66 | 414 | putative heat shock protein; conserved hypothetical protein [Escherichia coli K12] |
| 226420 | 66 | 66 | 0 | 2 | 95 | 370 | putative lysyl-tRNA synthetase [Escherichia coli K12] |
| 226597 | 66 | 66 | 0 | 0 | 242 | 339 | diaminopimelate epimerase [Escherichia coli K12] |
| 259014 | 66 | 66 | 0 | 0 | 200 | 296 | 5,10-methylene-tetrahydrofolate dehydrogenase; 5,10-methylene-tetrahydrofolate cyclohydrolase; bifunctional: 5,10-methylene-tetrahydrofolate dehydrogenase; 5,10-methylene-tetrahydrofolate cyclohydrolase [Escherichia coli K12] |
| 257332 | 66 | 66 | 0 | 1 | 87 | 257 | imidazole glycerol phosphate synthase subunit in heterodimer with HisH = imidazole glycerol phsphate synthase holoenzyme; imidazole glycerol phosphate synthase, subunit with HisH [Escherichia coli K12] |
| 207401 | 66 | 66 | 0 | 2 | 177 | 177 | lipid A 4' kinase; tetraacyldisaccharide 4' kinase (lipid A 4'kinase) [Escherichia coli K12] |
| 221830 | 66 | 66 | 0 | 0 | 103 | 106 | orf, hypothetical protein; putative phosphatase [Escherichia coli K12] |
| 233037 | 66 | 66 | 0 | 1 | 247 | 52 | 50S ribosomal subunit protein A [Escherichia coli K12] |
| 257522 | 67 | 66 | 1 | 0 | 218 | 432 | citrate synthase [Escherichia coli K12] |
| 254584 | 67 | 66 | 1 | 1 | 196 | 91 | 30S ribosomal subunit protein S15 [Escherichia coli K12] |
| 233833 | 83 | 66 | 2 | 1 | 102 | 775 | medium-long-chain fatty acyl-CoA dehydrogenase; putative medium-/long-chain acyl-CoA dehydrogenase [Escherichia coli K12] |
| 257215 | 65 | 65 | 0 | 0 | 167 | 1121 | isoleucine tRNA synthetase [Escherichia coli K12] |
| 258574 | 65 | 65 | 0 | 0 | 65 | 726 | glycine tRNA synthetase, beta subunit [Escherichia coli K12] |
| 254606 | 65 | 65 | 0 | 2 | 108 | 692 | DnaK-homologue chaperone Hsc66; chaperone (Hsp70 family), believed to be involved in assembly of Fe-S clusters [Escherichia coli K12] |
| 259221 | 65 | 65 | 0 | 0 | 105 | 434 | tRNA nucleotidyl transferase [Escherichia coli K12] |
| 260876 | 65 | 65 | 0 | 0 | 65 | 409 | putative periplasmic binding transport protein; putative periplasmic binding protein of transport system [Escherichia coli K12] |
| 210481 | 65 | 65 | 0 | 0 | 167 | 352 | orf, hypothetical protein; putative enzyme [Escherichia coli K12] |
| 188582 | 65 | 65 | 0 | 1 | 66 | 352 | orf, hypothetical protein; putative RNA 2'-O-ribose methyltransferase [Escherichia coli K12] |
| 209007 | 65 | 65 | 0 | 0 | 103 | 213 | putative transport portein; putative transport protein, possibly in biosynthesis of type IV pilin [Escherichia coli K12] |
| 243456 | 65 | 65 | 0 | 0 | 233 | 182 | heat shock protein hslVU, proteasome-related peptidase subunit; peptidase component of the HslUV protease [Escherichia coli K12] |
| 239868 | 65 | 65 | 0 | 0 | 88 | 156 | orf, hypothetical protein; putative transport protein (ABC superfamily, peri_bind) [Escherichia coli K12] |
| 256399 | 65 | 65 | 0 | 1 | 227 | 145 | catabolic dehydroquinase [Xanthomonas campestris pv. campestris str. ATCC 33913] |
| 197539 | 65 | 65 | 0 | 0 | 73 | 125 | succinate dehydrogenase, cytochrome b556 [Escherichia coli K12] |
| 257473 | 65 | 65 | 0 | 0 | 121 | 118 | orf, hypothetical protein; conserved hypothetical protein [Escherichia coli K12] |
| 179619 | 65 | 65 | 0 | 0 | 89 | 104 | putative sulfite reductase (EC 1.8.-.-); conserved hypothetical protein [Escherichia coli K12] |
| 254668 | 65 | 65 | 0 | 2 | 67 | 99 | possible regulator of murein genes; transcriptional activator of morphogenic pathway (BolA family), important in general stress response [Escherichia coli K12] |
| 261224 | 65 | 65 | 0 | 1 | 66 | 64 | RNA polymerase, omega subunit [Escherichia coli K12] |
| 257715 | 64 | 64 | 0 | 2 | 66 | 1157 | putative oxidase; putative oxidase, FAD-binding [Escherichia coli K12] |
| 257661 | 64 | 64 | 0 | 0 | 187 | 1055 | pyruvate dehydrogenase (decarboxylase component); pyruvate dehydrogenase, decarboxylase subunit, thiamin-binding [Escherichia coli K12] |
| 258365 | 64 | 64 | 0 | 2 | 149 | 893 | phosphoenolpyruvate synthase [Escherichia coli K12] |
| 259218 | 64 | 64 | 0 | 0 | 64 | 845 | phenylalanine tRNA synthetase, beta-subunit [Escherichia coli K12] |
| 182963 | 64 | 64 | 0 | 0 | 145 | 462 | methionine adenosyltransferase 1 (AdoMet synthetase); methyl and propylamine donor, corepressor of met genes; methionine adenosyltransferase 1 (AdoMet synthetase) [Escherichia coli K12] |
| 255574 | 64 | 64 | 0 | 0 | 82 | 458 | orf, hypothetical protein; putative protease [Escherichia coli K12] |
| 202224 | 64 | 64 | 0 | 0 | 106 | 440 | transcription termination factor Rho; polarity suppressor [Escherichia coli K12] |
| 257747 | 64 | 64 | 0 | 0 | 162 | 264 | cell division inhibitor, a membrane ATPase, activates minC; cell division inhibitor, membrane ATPase, activates MinC [Escherichia coli K12] |
| 257197 | 64 | 64 | 0 | 0 | 90 | 218 | negative regulator for pho regulon and putative enzyme in phosphate metabolism; transcriptional repressor for high-affinity phosphate uptake [Escherichia coli K12] |
| 189398 | 64 | 64 | 0 | 1 | 215 | 202 | orf, hypothetical protein; conserved protein [Escherichia coli K12] |
| 258200 | 64 | 64 | 0 | 1 | 65 | 189 | orf, hypothetical protein; putative phosphoheptose isomerase [Escherichia coli K12] |
| 219453 | 64 | 64 | 0 | 0 | 123 | 179 | 50S ribosomal subunit protein L5 [Escherichia coli K12] |
| 258789 | 64 | 64 | 0 | 0 | 79 | 81 | orf, hypothetical protein; conserved hypothetical protein [Escherichia coli K12] |
| 253559 | 64 | 64 | 0 | 0 | 64 | 74 | rhodanese (thiosulfate:cyanide sulfertransferase); thiosulfate/cyanide sulfurtransferase (rhodanese) [Escherichia coli K12] |
| 250867 | 65 | 64 | 1 | 1 | 160 | 72 | stress induced DNA replication inhibitor.; DNA replication inhibitor, nucleic acid-binding domain [Escherichia coli K12] |
| 202799 | 76 | 64 | 1 | 0 | 169 | 160 | menaquinone biosynthesis, unknown; putative methyltransferase in menaquinone biosynthesis protein [Escherichia coli K12] |
| 258476 | 63 | 63 | 0 | 0 | 94 | 614 | ssDNA exonuclease, 5' --> 3' specific; ssDNA exonuclease, 5' --> 3'-specific, Mg-dependent [Escherichia coli K12] |
| 89796 | 63 | 63 | 0 | 1 | 228 | 486 | tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase [Escherichia coli K12] |
| 259188 | 63 | 63 | 0 | 0 | 89 | 418 | flavoprotein affecting synthesis of DNA and pantothenate metabolism; bifunctional: 4'-phosphopantothenoylcysteine decarboxylase; phosphopantothenoylcysteine synthetase, FMN-binding [Escherichia coli K12] |
| 197142 | 63 | 63 | 0 | 0 | 236 | 393 | 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase; putative enzyme involved in formation of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate [Escherichia coli K12] |
| 256132 | 63 | 63 | 0 | 0 | 101 | 363 | pyridoxine biosynthesis; NAD-dependent dehydrogenase/carboxylase, pyridoxine phosphate biosynthetic protein PdxJ-PdxA subunit [Escherichia coli K12] |
| 247863 | 63 | 63 | 0 | 0 | 221 | 352 | dihydro-orotate dehydrogenase; dihydro-orotate oxidase, FMN-linked [Escherichia coli K12] |
| 238687 | 63 | 63 | 0 | 1 | 212 | 300 | CTP:CMP-3-deoxy-D-manno-octulosonate transferase [Escherichia coli K12] |
| 258949 | 63 | 63 | 0 | 0 | 94 | 295 | orf, hypothetical protein; conserved hypothetical protein [Escherichia coli K12] |
| 257485 | 63 | 63 | 0 | 0 | 118 | 295 | malonyl-CoA-[acyl-carrier-protein] transacylase [Escherichia coli K12] |
| 258438 | 63 | 63 | 0 | 0 | 80 | 282 | RNA polymerase, sigma S (sigma38) factor; synthesis of many growth phase related proteins; sigma S (sigma 38) factor of RNA polymerase, major sigma factor during stationary phase [Escherichia coli K12] |
| 213610 | 63 | 63 | 0 | 0 | 139 | 240 | D-ribulose-5-phosphate 3-epimerase [Escherichia coli K12] |
| 258440 | 63 | 63 | 0 | 0 | 102 | 163 | Holliday junction nuclease; resolution of structures; repair; Holliday junction nuclease [Escherichia coli K12] |
| 256590 | 63 | 63 | 0 | 0 | 63 | 145 | transcription termination; L factor [Escherichia coli K12] |
| 177496 | 63 | 63 | 0 | 0 | 63 | 138 | cell division protein involved in FtsZ ring [Escherichia coli K12] |
| 259521 | 63 | 63 | 0 | 0 | 111 | 134 | 50S ribosomal subunit protein L17 [Escherichia coli K12] |
| 229589 | 62 | 62 | 0 | 0 | 62 | 1033 | probable ATP-dependent RNA helicase; ATPase associated with RNA polymerase and transcriptional activator [Escherichia coli K12] |
| 189623 | 62 | 62 | 0 | 0 | 218 | 736 | 1-deoxyxylulose-5-phosphate synthase; flavoprotein; 1-deoxyxylulose-5-phosphate synthase; flavoprotein, thiamin-binding [Escherichia coli K12] |
| 257367 | 62 | 62 | 0 | 0 | 168 | 682 | glutamine tRNA synthetase [Escherichia coli K12] |
| 229313 | 62 | 62 | 0 | 3 | 224 | 440 | diaminohydroxyphosphoribosylaminopyrimidine deaminase; 5-amino-6-(5-phosphoribosylamino)uracil reductase; bifunctional: diaminohydroxyphosphoribosylaminopyrimidine deaminase (N-terminal); 5-amino-6-(5-phosphoribosylamino) uracil reductase [Escherichia coli K12] |
| 172190 | 62 | 62 | 0 | 3 | 131 | 324 | cell division membrane protein; cell division protein: membrane binding (N-terminal); GTPase domain (C-terminal) [Escherichia coli K12] |
| 260851 | 62 | 62 | 0 | 0 | 62 | 289 | CDP-diglyceride synthetase; CDP-diglyceride synthase [Escherichia coli K12] |
| 257216 | 62 | 62 | 0 | 0 | 98 | 267 | hypothetical tRNA/rRNA methyltransferase; putative methyl transferase in Fe-S cluster assembly [Escherichia coli K12] |
| 185448 | 62 | 62 | 0 | 0 | 68 | 213 | orf, hypothetical protein; putative regulator (TetR/AcrR family) [Escherichia coli K12] |
| 239308 | 62 | 62 | 0 | 3 | 226 | 205 | cyclic AMP receptor protein; transcriptional regulator, cyclic AMP receptor protein (CAMP-binding family), interacts with RNAP [Escherichia coli K12] |
| 260695 | 62 | 62 | 0 | 2 | 74 | 164 | orf, hypothetical protein; conserved hypothetical protein [Escherichia coli K12] |
| 250735 | 62 | 62 | 0 | 1 | 63 | 141 | phosphatidylglycerophosphatase; phosphatidylglycerophosphatase A [Escherichia coli K12] |
| 211709 | 62 | 62 | 0 | 0 | 121 | 115 | orf, hypothetical protein; conserved hypothetical protein [Escherichia coli K12] |
| 188692 | 62 | 62 | 0 | 0 | 189 | 51 | 50S ribosomal subunit protein L29 [Escherichia coli K12] |
| 258451 | 63 | 62 | 1 | 0 | 212 | 246 | acetylCoA carboxylase, carboxytransferase component, beta subunit; acetylCoA carboxylase, carboxyltranferase subunit beta [Escherichia coli K12] |
| 258468 | 63 | 62 | 1 | 0 | 96 | 209 | cytidylate kinase; cytidine monophosphate (CMP) kinase [Escherichia coli K12] |
| 188329 | 61 | 61 | 0 | 2 | 232 | 1979 | glutamate synthase, large subunit [Escherichia coli K12] |
| 233167 | 61 | 61 | 0 | 0 | 61 | 1549 | orf, hypothetical protein; conserved protein [Escherichia coli K12] |
| 231670 | 61 | 61 | 0 | 0 | 116 | 778 | polynucleotide phosphorylase; cytidylate kinase activity; polynucleotide phosphorylase, has polyadenylase activity [Escherichia coli K12] |
| 258934 | 61 | 61 | 0 | 1 | 172 | 537 | 2-oxoglutarate dehydrogenase (dihydrolipoyltranssuccinase E2 component); dihydrolipoyltranssuccinate transferase, component of the 2-oxoglutarate dehydrogenase complex [Escherichia coli K12] |
| 258548 | 61 | 61 | 0 | 0 | 240 | 507 | IMP dehydrogenase; IMP dehydrogeanse [Escherichia coli K12] |
| 258131 | 61 | 61 | 0 | 0 | 86 | 492 | putative sporulation protein; conserved hypothetical protein [Escherichia coli K12] |
| 255009 | 61 | 61 | 0 | 0 | 61 | 484 | exonuclease I, 3' --> 5' specific; deoxyribophosphodiesterase; exonuclease I, 3' --> 5'-specific; deoxyribophosphodiesterase [Escherichia coli K12] |
| 246683 | 61 | 61 | 0 | 0 | 185 | 349 | putative alpha helix protein; conserved protein [Escherichia coli K12] |
| 177810 | 61 | 61 | 0 | 0 | 117 | 338 | putative thioredoxin-like protein; putative thioredoxin protein [Escherichia coli K12] |
| 216333 | 61 | 61 | 0 | 0 | 124 | 289 | orf, hypothetical protein; conserved protein [Escherichia coli K12] |
| 195356 | 61 | 61 | 0 | 0 | 132 | 271 | peptide chain release factor RF-2 [Escherichia coli K12] |
| 251580 | 61 | 61 | 0 | 0 | 61 | 248 | putative oxidoreductase; putative oxoacyl-(acyl carrier protein) reductase [Escherichia coli K12] |
| 166385 | 61 | 61 | 0 | 0 | 120 | 232 | 30S ribosomal subunit protein S3 [Escherichia coli K12] |
| 257146 | 61 | 61 | 0 | 1 | 89 | 196 | putative protease; putative peptidase [Escherichia coli K12] |
| 256589 | 61 | 61 | 0 | 1 | 90 | 171 | putative transferase; putative acyl transferase, ferripyochelin-binding [Escherichia coli K12] |
| 258110 | 61 | 61 | 0 | 0 | 129 | 169 | oligoribonuclease [Escherichia coli K12] |
| 256417 | 61 | 61 | 0 | 0 | 74 | 97 | probable sigma-54 modulation protein; putative sigma N (sigma 54) modulator [Escherichia coli K12] |
| 260377 | 61 | 61 | 0 | 0 | 139 | 77 | 30S ribosomal subunit protein S16 [Escherichia coli K12] |
| 181034 | 62 | 61 | 1 | 0 | 107 | 333 | leader peptidase (signal peptidase I); leader peptidase (signal peptidase I), serine protease [Escherichia coli K12] |
| 258904 | 62 | 61 | 1 | 0 | 177 | 227 | 30S ribosomal subunit protein S4 [Escherichia coli K12] |
| 260225 | 83 | 61 | 2 | 0 | 83 | 304 | putative heat shock protein; palmitoleoyl-acyl carrier protein (ACP)-dependent acyltransferase, cold-induced gene [Escherichia coli K12] |
| 225807 | 86 | 61 | 1 | 0 | 235 | 288 | putative dethiobiotin synthetase [Escherichia coli K12] |
| 260204 | 60 | 60 | 0 | 2 | 62 | 663 | protease IV, a signal peptide peptidase [Escherichia coli K12] |
| 259045 | 60 | 60 | 0 | 0 | 105 | 529 | lipoamide dehydrogenase (NADH); component of 2-oxodehydrogenase and pyruvate complexes; L-protein of glycine cleavage complex; dihydrolipoamide dehydrogenase, FAD/NAD(P)-binding, component of the 2-oxoglutarate dehydrogenase and the pyruvate dehydrogenase complexes [Escherichia coli K12] |
| 259989 | 60 | 60 | 0 | 0 | 155 | 479 | phosphoglycerate kinase [Escherichia coli K12] |
| 259227 | 60 | 60 | 0 | 0 | 60 | 401 | putative membrane protein [Escherichia coli K12] |
| 261153 | 60 | 60 | 0 | 1 | 61 | 390 | orf, hypothetical protein; conserved hypothetical protein [Escherichia coli K12] |
| 258039 | 60 | 60 | 0 | 3 | 89 | 326 | 10-formyltetrahydrofolate:L-methionyl-tRNA(fMet) N-formyltransferase [Escherichia coli K12] |
| 239107 | 60 | 60 | 0 | 0 | 125 | 299 | positive transcriptional regulator for cysteine regulon; transcriptional regulator of biosynthesis of L-cysteine and regulator of sulfur assimilation (LysR familiy) [Escherichia coli K12] |
| 213540 | 60 | 60 | 0 | 0 | 118 | 224 | 30S ribosomal subunit protein S2 [Escherichia coli K12] |
| 247456 | 60 | 60 | 0 | 2 | 88 | 207 | putative carrier/transport protein; putative transport protein (TEGT family) [Escherichia coli K12] |
| 181325 | 60 | 60 | 0 | 3 | 114 | 188 | orf, hypothetical protein; adenosine diphosphate sugar pyrophosphatase [Escherichia coli K12] |
| 180358 | 60 | 60 | 0 | 0 | 243 | 163 | acetolactate synthase III, valine sensitive, small subunit; acetolactate synthase III, small subunit [Escherichia coli K12] |
| 207776 | 60 | 60 | 0 | 1 | 246 | 132 | 50S ribosomal subunit protein L10 [Escherichia coli K12] |
| 256271 | 60 | 60 | 0 | 0 | 154 | 106 | 50S ribosomal subunit protein L22 [Escherichia coli K12] |
| 176134 | 60 | 60 | 0 | 0 | 69 | 105 | succinate dehydrogenase, hydrophobic subunit [Escherichia coli K12] |
| 162952 | 60 | 60 | 0 | 2 | 114 | 93 | cell division inhibitor, inhibits ftsZ ring formation [Escherichia coli K12] |
| 225843 | 60 | 60 | 0 | 0 | 213 | 54 | 30S ribosomal subunit protein S14 [Escherichia coli K12] |
| 178219 | 61 | 60 | 1 | 0 | 193 | 138 | FKBX-type 16KD peptidyl-prolyl cis-trans isomerase (a rotamase); FKBP-type peptidyl-prolyl cis-trans isomerase (rotamase) [Escherichia coli K12] |
| 174143 | 59 | 59 | 0 | 0 | 153 | 1425 | preprotein translocase; secretion protein; preprotein translocase, ATPase secretion component (General Secretory Pathway) [Escherichia coli K12] |
| 222944 | 59 | 59 | 0 | 1 | 219 | 823 | orf, hypothetical protein; putative kinase [Escherichia coli K12] |
| 255955 | 59 | 59 | 0 | 0 | 101 | 729 | oligopeptidase A [Escherichia coli K12] |
| 237130 | 59 | 59 | 0 | 0 | 127 | 454 | first step in murein biosynthesis;UDP-N-glucosamine 1-carboxyvinyltransferase; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [Escherichia coli K12] |
| 171609 | 59 | 59 | 0 | 3 | 131 | 450 | electron transport complex protein; putative oxidoreductase, transmembrane protein [Escherichia coli K12] |
| 241913 | 59 | 59 | 0 | 2 | 135 | 356 | bifunctional protein catalysing steps in LPS core prescursor synthesis; bifunctional ADP-L-glycero-D-manno-heptose synthase: putaive kinase (N-terminal); putative sugar nucleotide transferase (C-terminal) [Escherichia coli K12] |
| 162559 | 59 | 59 | 0 | 0 | 177 | 351 | Hsp33; redox regulated chaperone; heat shock protein 33, redox regulated chaperone [Escherichia coli K12] |
| 259282 | 59 | 59 | 0 | 2 | 188 | 318 | ATP:sulfurylase (ATP:sulfate adenylyltransferase), subunit 2; ATP-sulfurylase, subunit 2 (ATP:sulfate adenylyltransferase) [Escherichia coli K12] |
| 221154 | 59 | 59 | 0 | 0 | 94 | 248 | biotin biosynthesis; reaction prior to pimeloyl CoA [Escherichia coli K12] |
| 260228 | 59 | 59 | 0 | 0 | 188 | 240 | L-isoaspartate protein carboxylmethyltransferase type II [Escherichia coli K12] |
| 180047 | 59 | 59 | 0 | 2 | 61 | 227 | putative phosphatase; putative enzyme with a phophatase-like domain [Escherichia coli K12] |
| 259012 | 59 | 59 | 0 | 0 | 59 | 210 | Holliday junction helicase subunit B; branch migration; repair; Holliday junction helicase, subunit A [Escherichia coli K12] |
| 257502 | 59 | 59 | 0 | 0 | 163 | 187 | adenylate kinase activity; pleiotropic effects on glycerol-3-phosphate acyltransferase activity; adenylate kinase [Escherichia coli K12] |
| 223772 | 59 | 59 | 0 | 0 | 90 | 187 | putative periplasmic protein [Escherichia coli K12] |
| 171467 | 59 | 59 | 0 | 0 | 84 | 187 | orf, hypothetical protein; conserved protein [Escherichia coli K12] |
| 256277 | 59 | 59 | 0 | 0 | 134 | 147 | 50S ribosomal subunit protein L15 [Escherichia coli K12] |
| 250906 | 59 | 59 | 0 | 3 | 62 | 134 | membrane-bound ATP synthase, F1 sector, epsilon-subunit [Escherichia coli K12] |
| 207127 | 59 | 59 | 0 | 3 | 241 | 97 | phosphoribosyl-amp cyclohydrolase; phosphoribosyl-ATP pyrophosphatase; bifunctional: phosphoribosyl-AMP cyclohydrolase (N-terminal); phosphoribosyl-ATP pyrophosphatase (C-terminal) [Escherichia coli K12] |
| 257696 | 59 | 59 | 0 | 0 | 230 | 70 | 30S ribosomal subunit protein S18 [Escherichia coli K12] |
| 245318 | 60 | 59 | 1 | 3 | 192 | 544 | ATP-sulfurylase (ATP:sulfate adenylyltransferase), subunit 1, probably a GTPase; ATP-sulfurylase, subunit 1 (ATP:sulfate adenylyltransferase) [Escherichia coli K12] |
| 232447 | 60 | 59 | 1 | 1 | 183 | 288 | putative sugar nucleotide epimerase; putative cell division inhibitor, NAD(P)-binding [Escherichia coli K12] |
| 259300 | 61 | 59 | 2 | 3 | 128 | 569 | NAD-linked malate dehydrogenase (malic enzyme); NAD-linked malate dehydrogenase [Escherichia coli K12] |
| 167818 | 68 | 59 | 2 | 3 | 123 | 452 | putative ATP-dependent protease [Escherichia coli K12] |
| 258801 | 58 | 58 | 0 | 1 | 168 | 731 | L-glutamine:D-fructose-6-phosphate aminotransferase [Escherichia coli K12] |
| 260298 | 58 | 58 | 0 | 1 | 59 | 455 | phosphatidylserine synthase; phospholipid synthesis; phosphatidylserine synthase (CDP-diacylglycerol-serine O-phosphatidyltransferase) [Escherichia coli K12] |
| 204054 | 58 | 58 | 0 | 0 | 117 | 361 | regulator of ftsI, penicillin binding protein 3, septation function; split gene in K-12, associated with mecillinam resistance, cell shape, ATPase domain [Escherichia coli K12] |
| 167928 | 58 | 58 | 0 | 0 | 148 | 336 | cell division; forms circumferential ring; tubulin-like GTP-binding protein and GTPase; tubulin-like GTP-binding protein and GTPase, forms circumferential ring in cell division [Escherichia coli K12] |
| 251110 | 58 | 58 | 0 | 0 | 97 | 271 | putative amidotransferase; conserved hypothetical protein [Escherichia coli K12] |
| 219348 | 58 | 58 | 0 | 0 | 58 | 200 | orf, hypothetical protein; conserved hypothetical protein [Escherichia coli K12] |
| 258329 | 58 | 58 | 0 | 1 | 86 | 192 | thymidine kinase [Escherichia coli K12] |
| 216252 | 58 | 58 | 0 | 0 | 58 | 146 | rod shape-determining protein [Escherichia coli K12] |
| 256276 | 58 | 58 | 0 | 0 | 132 | 123 | 50S ribosomal subunit protein L18 [Escherichia coli K12] |
| 161377 | 59 | 58 | 1 | 3 | 128 | 208 | cyclic 3',5'-adenosine monophosphate phosphodiesterase [Escherichia coli K12] |
| 252176 | 59 | 58 | 1 | 1 | 60 | 87 | molybdopterin biosynthesis; molybdopterin biosynthesis protein D [Escherichia coli K12] |
| 257809 | 62 | 58 | 3 | 2 | 244 | 89 | DNA-binding protein HU-beta, NS1 (HU-1); DNA-binding protein HU-beta, NS1 (HU-1), plays a role in DNA replication and in rpo translation [Escherichia coli K12] |
| 258129 | 57 | 57 | 0 | 0 | 132 | 1010 | aminopeptidase N; aminopeptidase N, a cysteinylglycinase [Escherichia coli K12] |
| 202743 | 57 | 57 | 0 | 1 | 235 | 756 | helicase, ATP-dependent [Escherichia coli K12] |
| 237195 | 57 | 57 | 0 | 0 | 139 | 651 | cysteine tRNA synthetase [Escherichia coli K12] |
| 259938 | 57 | 57 | 0 | 0 | 241 | 481 | glutamine synthetase [Escherichia coli K12] |
| 258049 | 57 | 57 | 0 | 0 | 193 | 456 | phospho-N-acetylmuramoyl-pentapeptide transferase?; phospho-N-acetylmuramoyl-pentapeptide transferase [Escherichia coli K12] |
| 254577 | 57 | 57 | 0 | 1 | 80 | 442 | orf, hypothetical protein; conserved hypothetical protein [Escherichia coli K12] |
| 253107 | 57 | 57 | 0 | 0 | 57 | 332 | UDP-N-acetylenolpyruvoylglucosamine reductase; UDP-N-acetylenolpyruvoylglucosamine reductase, FAD-binding [Escherichia coli K12] |
| 238486 | 57 | 57 | 0 | 0 | 236 | 309 | orf, hypothetical protein; putative enzyme with methyltransferase domain [Escherichia coli K12] |
| 250919 | 57 | 57 | 0 | 2 | 64 | 295 | ATP phosphoribosyltransferase [Escherichia coli K12] |
| 255051 | 57 | 57 | 0 | 2 | 59 | 277 | putative transport system permease protein; putative transport protein (CDF family) [Escherichia coli K12] |
| 258466 | 57 | 57 | 0 | 0 | 89 | 272 | orf, hypothetical protein; putative hydrolase [Escherichia coli K12] |
| 260253 | 57 | 57 | 0 | 1 | 58 | 252 | transcriptional regulator for pyruvate dehydrogenase complex; transcriptional repressor for pyruvate dehydrogenase complex (GntR family) [Escherichia coli K12] |
| 258077 | 57 | 57 | 0 | 0 | 149 | 215 | ATP-binding component of a membrane-associated complex involved in cell division; putative transport protein (ABC superfamily, atp_bind) [Escherichia coli K12] |
| 259115 | 57 | 57 | 0 | 0 | 104 | 199 | guanylate kinase [Escherichia coli K12] |
| 256275 | 57 | 57 | 0 | 0 | 174 | 192 | 50S ribosomal subunit protein L6 [Escherichia coli K12] |
| 259686 | 57 | 57 | 0 | 0 | 127 | 101 | 30S ribosomal subunit protein S6 [Escherichia coli K12] |
| 255846 | 56 | 56 | 0 | 0 | 101 | 778 | ribonuclease R; RNase R [Escherichia coli K12] |
| 207398 | 56 | 56 | 0 | 0 | 161 | 766 | putative outer membrane antigen [Escherichia coli K12] |
| 252603 | 56 | 56 | 0 | 3 | 80 | 642 | orf, hypothetical protein; conserved protein [Escherichia coli K12] |
| 199810 | 56 | 56 | 0 | 0 | 159 | 484 | chaperone with DnaK; heat shock protein; heat shock protein (Hsp40), co-chaperone with DnaK [Escherichia coli K12] |
| 259038 | 56 | 56 | 0 | 0 | 126 | 449 | histidine tRNA synthetase [Escherichia coli K12] |
| 171474 | 56 | 56 | 0 | 2 | 188 | 446 | IspH protein; enzyme in pathway of mevalonate-independent isoprenoid biosynthesis [Escherichia coli K12] |
| 205780 | 56 | 56 | 0 | 2 | 68 | 393 | tRNA (uracil-5-)-methyltransferase [Escherichia coli K12] |
| 245735 | 56 | 56 | 0 | 0 | 91 | 360 | histidine protein kinase sensor for GlnG regulator (nitrogen regulator II, NRII); sensory kinase (soluble) in two-component regulatory system with GlnG, nitrogen regulation (nitrogen regulator II, NRII) [Escherichia coli K12] |
| 257238 | 56 | 56 | 0 | 0 | 116 | 344 | glycerolphosphate auxotrophy in plsB background; fatty acid/phospholipid synthesis protein, methyltransferase domain [Escherichia coli K12] |
| 217340 | 56 | 56 | 0 | 0 | 184 | 331 | orf, hypothetical protein; conserved protein [Escherichia coli K12] |
| 196902 | 56 | 56 | 0 | 1 | 122 | 287 | probable regulator for maltose metabolism; transcriptional regulator of maltose metabolism [Escherichia coli K12] |
| 186075 | 56 | 56 | 0 | 1 | 57 | 248 | required for sulfate transport [Escherichia coli K12] |
| 162132 | 56 | 56 | 0 | 0 | 152 | 233 | DNA helicase, ATP-dependent dsDNA/ssDNA exonuclease V subunit, ssDNA endonuclease; exonuclease V, alpha chain with recC and recD: 5' and 3' nuclease, ATPase, recombinase, helicase [Escherichia coli K12] |
| 175968 | 56 | 56 | 0 | 1 | 191 | 222 | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; 4-diphosphocytidyl-2C-methyl-D-erythritol synthase [Escherichia coli K12] |
| 254506 | 56 | 56 | 0 | 2 | 58 | 212 | orf, hypothetical protein; putative enzyme with PLP-binding domain [Escherichia coli K12] |
| 257806 | 56 | 56 | 0 | 0 | 69 | 203 | uridine/cytidine kinase [Escherichia coli K12] |
| 206157 | 56 | 56 | 0 | 0 | 56 | 179 | orf, hypothetical protein; putative phage-like protein [Escherichia coli K12] |
| 250971 | 56 | 56 | 0 | 0 | 56 | 160 | orf, hypothetical protein; conserved hypothetical protein [Escherichia coli K12] |
| 222967 | 56 | 56 | 0 | 1 | 194 | 51 | ribosomal protein L28 [Vibrio cholerae O1 biovar eltor str. N16961] |
| 193911 | 58 | 56 | 2 | 0 | 226 | 649 | putative 2-component regulator; putative enzyme (N-terminal); putative transcriptional regulator (C-terminal) [Escherichia coli K12] |
| 237148 | 55 | 55 | 0 | 0 | 128 | 1437 | B12-dependent homocysteine-N5-methyltetrahydrofolate transmethylase, repressor of metE and metF; B12-dependent homocysteine-N5-methyltetrahydrofolate transmethylase [Escherichia coli K12] |
| 190643 | 55 | 55 | 0 | 0 | 147 | 1325 | excision nuclease subunit A; DNA excision repair enzyme subunit, with UvrBC [Escherichia coli K12] |
| 260059 | 55 | 55 | 0 | 0 | 206 | 1221 | leucine tRNA synthetase [Escherichia coli K12] |
| 258624 | 55 | 55 | 0 | 0 | 113 | 841 | DNA helicase, resolution of Holliday junctions, branch migration; DNA helicase, ATP-dependent resolution of Holliday junctions, branch migration [Escherichia coli K12] |
| 258914 | 55 | 55 | 0 | 0 | 112 | 668 | 6-phosphogluconate dehydratase [Escherichia coli K12] |
| 257760 | 55 | 55 | 0 | 0 | 153 | 487 | cysteine desulfurase; cysteine desulfurase (tRNA sulfurtransferase) PLP-dependent [Escherichia coli K12] |
| 260215 | 55 | 55 | 0 | 1 | 106 | 424 | poly(A) polymerase I [Escherichia coli K12] |
| 196336 | 55 | 55 | 0 | 0 | 236 | 410 | quinolinate synthetase, A protein [Escherichia coli K12] |
| 239517 | 55 | 55 | 0 | 1 | 178 | 400 | sulfur transfer protein; sulfur transfer protein (from cys to ThiS and from IscS to U8-tRNA) [Escherichia coli K12] |
| 257437 | 55 | 55 | 0 | 0 | 100 | 368 | rod shape-determining membrane protein; sensitivity to radiation and drugs; rod shape-determining membrane protein; cell elongation [Escherichia coli K12] |
| 258375 | 55 | 55 | 0 | 0 | 122 | 349 | putative apolipoprotein; S-adenosyl-dependent methyl transferase [Escherichia coli K12] |
| 253150 | 55 | 55 | 0 | 0 | 55 | 336 | homoserine kinase [Escherichia coli K12] |
| 216788 | 55 | 55 | 0 | 0 | 203 | 281 | orf, hypothetical protein; conserved protein [Escherichia coli K12] |
| 177360 | 55 | 55 | 0 | 0 | 137 | 248 | orf, hypothetical protein [Escherichia coli K12] |
| 259055 | 55 | 55 | 0 | 0 | 69 | 228 | orf, hypothetical protein; conserved protein, FMN-linked [Escherichia coli K12] |
| 259636 | 55 | 55 | 0 | 0 | 239 | 212 | uracil phosphoribosyltransferase [Escherichia coli K12] |
| 260897 | 55 | 55 | 0 | 0 | 183 | 110 | orf, hypothetical protein; putative protein kinase C inhibitor [Escherichia coli K12] |
| 259562 | 55 | 55 | 0 | 3 | 132 | 80 | orf, hypothetical protein; putative ferredoxin [Escherichia coli K12] |
| 165099 | 55 | 55 | 0 | 2 | 57 | 77 | orf, hypothetical protein; putative transcriptional regulator (BolA family) [Escherichia coli K12] |
| 256562 | 56 | 55 | 1 | 0 | 95 | 89 | peptidyl-prolyl cis-trans isomerase C (rotamase C) [Escherichia coli K12] |
| 208846 | 57 | 55 | 1 | 0 | 171 | 610 | potassium uptake, requires TrkE; potassium transport protein, requires TrkE (Trk family) [Escherichia coli K12] |
| 252607 | 57 | 55 | 1 | 1 | 75 | 487 | succinylglutamic semialdehyde dehydrogenase [Escherichia coli K12] |
| 259924 | 54 | 54 | 0 | 0 | 82 | 670 | 60 KD inner-membrane protein; preprotein translocase, cooperates with SecYE translocon, membrane component [Escherichia coli K12] |
| 260883 | 54 | 54 | 0 | 0 | 70 | 487 | D-alanine:D-alanine-adding enzyme [Escherichia coli K12] |
| 258319 | 54 | 54 | 0 | 0 | 96 | 471 | glutathione oxidoreductase; glutathione oxidoreductase, nucleotide-binding [Escherichia coli K12] |
| 250956 | 54 | 54 | 0 | 0 | 54 | 450 | gamma-glutamate-cysteine ligase [Escherichia coli K12] |
| 171742 | 54 | 54 | 0 | 0 | 90 | 364 | putative membrane protein; protease, membrane-associated [Escherichia coli K12] |
| 164196 | 54 | 54 | 0 | 0 | 223 | 364 | protein chain elongation factor EF-Ts [Escherichia coli K12] |
| 258449 | 54 | 54 | 0 | 0 | 73 | 307 | 23S rRNA pseudouridine synthase; pseudouridine synthase (pseudouridines 1911, 1915, 1917 in 23S RNA) [Escherichia coli K12] |
| 258045 | 54 | 54 | 0 | 0 | 128 | 296 | UDP-3-O-acyl N-acetylglucosamine deacetylase; lipid A biosynthesis; UDP-3-O-acyl N-acetylglucosamine deacetylase [Escherichia coli K12] |
| 173246 | 54 | 54 | 0 | 3 | 238 | 269 | regulator for SOS(lexA) regulon; transcriptional repressor for SOS response (signal peptidase of LexA family) [Escherichia coli K12] |
| 177936 | 54 | 54 | 0 | 0 | 146 | 234 | putative enzyme; putative enzyme, NAD(P)-binding [Escherichia coli K12] |
| 250774 | 54 | 54 | 0 | 1 | 111 | 169 | regulates ampC; N-acetyl-anhydromuramyl-L-alanine amidase [Escherichia coli K12] |
| 258297 | 54 | 54 | 0 | 0 | 104 | 164 | acetylCoA carboxylase, BCCP subunit; carrier of biotin; acetyl-CoA carboxylase, biotin carboxyl carrier protein subunit [Escherichia coli K12] |
| 176480 | 54 | 54 | 0 | 0 | 54 | 161 | orf, hypothetical protein; conserved protein [Escherichia coli K12] |
| 93162 | 54 | 54 | 0 | 2 | 184 | 156 | protein used in recombination and DNA repair [Escherichia coli K12] |
| 258091 | 54 | 54 | 0 | 0 | 137 | 142 | 30S ribosomal subunit protein S9 [Escherichia coli K12] |
| 258302 | 54 | 54 | 0 | 0 | 122 | 137 | (3R)-hydroxymyristol acyl carrier protein dehydratase [Escherichia coli K12] |
| 181210 | 54 | 54 | 0 | 2 | 177 | 130 | orf, hypothetical protein; putative periplasmic gluconate-binding protein in GNT I transport system [Escherichia coli K12] |
| 250965 | 54 | 54 | 0 | 0 | 54 | 85 | orf, hypothetical protein; conserved hypothetical protein [Escherichia coli K12] |
| 181691 | 55 | 54 | 1 | 3 | 94 | 300 | regulator for metE and metH; transcriptional regulator of methionine biosynthesis (LysR family) [Escherichia coli K12] |
| 258332 | 55 | 54 | 1 | 1 | 56 | 274 | DNA adenine methylase [Escherichia coli K12] |
| 260260 | 55 | 54 | 1 | 0 | 186 | 128 | FKBP-type 22KD peptidyl-prolyl cis-trans isomerase (rotamase) [Escherichia coli K12] |
| 161340 | 56 | 54 | 1 | 3 | 222 | 111 | molybdopterin converting factor, subunit 2 [Escherichia coli K12] |
| 202385 | 56 | 54 | 2 | 2 | 189 | 65 | pyruvate dehydrogenase (dihydrolipoyltransacetylase component); pyruvate dehydrogenase, dihydrolipoyltransacetylase subunit [Escherichia coli K12] |
| 199234 | 59 | 54 | 1 | 0 | 97 | 127 | thiol:disulfide interchange protein; copper tolerance; thiol:disulfide interchange protein, cytochrome c-type biogenesis, electron carrier, N-terminal interacts with and activates DsbC [Escherichia coli K12] |
| 221384 | 70 | 54 | 1 | 2 | 244 | 116 | DNA-dependent ATPase I and helicase II [Escherichia coli K12] |
| 167650 | 53 | 53 | 0 | 0 | 236 | 1328 | DNA ligase [Escherichia coli K12] |
| 257777 | 53 | 53 | 0 | 0 | 120 | 927 | methyl-directed mismatch repair; methyl-directed mismatch repair, recognizes exocyclic adducts of guanosine [Escherichia coli K12] |
| 259113 | 53 | 53 | 0 | 0 | 108 | 687 | putative ATP-binding component of a transport system; putative transport protein (ABC superfamily, atp_bind) [Escherichia coli K12] |
| 196213 | 53 | 53 | 0 | 0 | 142 | 685 | glucose-inhibited division; chromosome replication?; glucose-inhibited division protein, oxidoreductase-like, FAD/NAD(P)-binding [Escherichia coli K12] |
| 235074 | 53 | 53 | 0 | 0 | 197 | 671 | deoxyribodipyrimidine photolyase (photoreactivation); deoxyribodipyrimidine photolyase (photoreactivation), FAD-binding [Escherichia coli K12] |
| 247362 | 53 | 53 | 0 | 3 | 143 | 603 | ATP-binding component of cytochrome-related transport; cytochrome-related transport protein (ABC superfamily, membrane (N-terminal), atp_bind (C-terminal)) [Escherichia coli K12] |
| 168013 | 53 | 53 | 0 | 0 | 105 | 562 | probable ATP-dependent protease; putative ATP-dependent protease, DNA repair protein [Escherichia coli K12] |
| 242135 | 53 | 53 | 0 | 0 | 128 | 444 | putative O-sialoglycoprotein endopeptidase [Escherichia coli K12] |
| 196391 | 53 | 53 | 0 | 3 | 128 | 440 | phosphoribosylglycinamide formyltransferase 2 [Escherichia coli K12] |
| 222566 | 53 | 53 | 0 | 2 | 168 | 427 | phosphoenolpyruvate carboxylase [Escherichia coli K12] |
| 260761 | 53 | 53 | 0 | 0 | 72 | 385 | ATP-dependent RNA helicase [Escherichia coli K12] |
| 258151 | 53 | 53 | 0 | 1 | 211 | 368 | thymidylate synthetase [Escherichia coli K12] |
| 257481 | 53 | 53 | 0 | 0 | 157 | 360 | 3-oxoacyl-[acyl-carrier-protein] synthase III; acetylCoA ACP transacylase [Escherichia coli K12] |
| 261237 | 53 | 53 | 0 | 0 | 90 | 300 | cysteine synthase B, O-acetylserine sulfhydrolase B; cysteine synthase B (O-acetylserine sulfhydrolase B) [Escherichia coli K12] |
| 241865 | 53 | 53 | 0 | 0 | 53 | 300 | DnaJ-like membrane chaperone protein; co-chaperone of DnaK (DnaJ-like), implicated in regulation of colanic acid capsule [Escherichia coli K12] |
| 258181 | 53 | 53 | 0 | 0 | 53 | 247 | orf, hypothetical protein; conserved hypothetical protein [Escherichia coli K12] |
| 218087 | 53 | 53 | 0 | 2 | 136 | 239 | cytochrome b561 homolog 2 [Escherichia coli K12] |
| 258783 | 53 | 53 | 0 | 0 | 116 | 194 | recombination and repair; putative recombination protein, gap repair [Escherichia coli K12] |
| 225164 | 53 | 53 | 0 | 0 | 157 | 191 | orf, hypothetical protein; conserved hypothetical protein, phosphatase-like domain [Escherichia coli K12] |
| 260773 | 53 | 53 | 0 | 0 | 95 | 172 | FKBP-type peptidyl-prolyl cis-trans isomerase (rotamase); FKBP-type peptidyl prolyl cis-trans isomerase (rotamase) [Escherichia coli K12] |
| 208823 | 53 | 53 | 0 | 0 | 83 | 164 | DnaJ-homologue co-chaperone protein Hsc20; co-chaperone protein Hsc20, believed to be involved in assembly of Fe-S clusters [Escherichia coli K12] |
| 200862 | 53 | 53 | 0 | 0 | 133 | 157 | 30S ribosomal subunit protein S7, initiates assembly [Escherichia coli K12] |
| 257695 | 53 | 53 | 0 | 0 | 113 | 146 | 50S ribosomal subunit protein L9 [Escherichia coli K12] |
| 184297 | 53 | 53 | 0 | 1 | 123 | 87 | 50S ribosomal subunit protein L25 [Escherichia coli K12] |
| 255466 | 53 | 53 | 0 | 1 | 112 | 53 | orf, hypothetical protein; unknown CDS [Escherichia coli K12] |
| 252617 | 54 | 53 | 1 | 0 | 54 | 643 | DNA topoisomerase III; DNA topoisomerase III, type 1 [Escherichia coli K12] |
| 161227 | 57 | 53 | 2 | 2 | 198 | 751 | sensor-regulator, activates OmpR by phophorylation; hybrid sensory histidine kinase in two-component regulatory system with UvrY [Escherichia coli K12] |
| 163636 | 57 | 53 | 1 | 3 | 129 | 287 | sensor protein PhoQ; sensory histidine kinase in two-component regulatory system with PhoP, regulates gene expression at low [Mg+], senses Mg+ [Escherichia coli K12] |
| 169239 | 60 | 53 | 2 | 0 | 232 | 558 | lysine tRNA synthetase, inducible; heat shock protein [Escherichia coli K12] |
| 259004 | 72 | 53 | 3 | 0 | 110 | 575 | probable third cytochrome oxidase, subunit I; cytochrome oxidase bd-II, subunit I [Escherichia coli K12] |
| 178541 | 52 | 52 | 0 | 0 | 108 | 688 | proline tRNA synthetase [Escherichia coli K12] |
| 251375 | 52 | 52 | 0 | 0 | 52 | 669 | carboxy-terminal protease for penicillin-binding protein 3 [Escherichia coli K12] |
| 235967 | 52 | 52 | 0 | 0 | 83 | 543 | meso-diaminopimelate-adding enzyme; UDP-N-acetylmuramoylalanyl-D-glutamate 2,6-diaminopimelate ligase [Escherichia coli K12] |
| 260722 | 52 | 52 | 0 | 0 | 52 | 375 | erythronate-4-phosphate dehyrogenase; erythronate-4-phosphate dehydrogenase [Escherichia coli K12] |
| 260209 | 52 | 52 | 0 | 0 | 56 | 330 | molybdopterin biosynthesis, protein A; molybdopterin biosynthesis protein A [Escherichia coli K12] |
| 250078 | 52 | 52 | 0 | 3 | 225 | 326 | putative isomerase; putative phospho-sugar-binding protein/isomerase [Escherichia coli K12] |
| 226631 | 52 | 52 | 0 | 0 | 52 | 318 | regulates activity of sigma-E factor; anti sigma E (sigma 24) factor, negative regulator [Escherichia coli K12] |
| 257933 | 52 | 52 | 0 | 0 | 88 | 312 | putative adenine-specific methylase; putative methyltransferase [Escherichia coli K12] |
| 254771 | 52 | 52 | 0 | 3 | 55 | 264 | orf, hypothetical protein; conserved hypothetical protein [Escherichia coli K12] |
| 255632 | 52 | 52 | 0 | 0 | 72 | 243 | High-affinity zinc uptake system membrane protein; high-affinity Zn transport protein (ABC superfamily, membrane) [Escherichia coli K12] |
| 260224 | 52 | 52 | 0 | 0 | 148 | 231 | putative ATPase; putative ATP-binding protein [Escherichia coli K12] |
| 247680 | 52 | 52 | 0 | 0 | 165 | 228 | ferrisiderophore reductase; flavin reductase (NADPH:flavin oxidoreductase); flavin reductase, NADP-linked domain [Escherichia coli K12] |
| 218839 | 52 | 52 | 0 | 0 | 114 | 227 | acetylornithine deacetylase [Escherichia coli K12] |
| 257176 | 52 | 52 | 0 | 0 | 81 | 203 | orf, hypothetical protein; putative membrane protein [Escherichia coli K12] |
| 256997 | 52 | 52 | 0 | 3 | 111 | 190 | orf, hypothetical protein; pseudouridine synthase (makes pseudouridine2457 in 23 S RNA) [Escherichia coli K12] |
| 259293 | 52 | 52 | 0 | 0 | 109 | 170 | orf, hypothetical protein; putative transport protein (ABC superfamily, peri_bind) [Escherichia coli K12] |
| 242792 | 52 | 52 | 0 | 0 | 52 | 149 | orf, hypothetical protein; conserved hypothetical protein [Escherichia coli K12] |
| 260795 | 52 | 52 | 0 | 3 | 135 | 123 | putative oxidoreductase; putative arsenate reductase [Escherichia coli K12] |
| 258198 | 52 | 52 | 0 | 2 | 99 | 69 | ATP synthase F0, C subunit [Vibrio cholerae O1 biovar eltor str. N16961] |
| 173331 | 52 | 52 | 0 | 0 | 52 | 66 | orf, hypothetical protein; conserved hypothetical protein [Escherichia coli K12] |
| 194546 | 52 | 52 | 0 | 0 | 52 | 64 | orf, hypothetical protein; conserved hypothetical protein [Escherichia coli K12] |
| 252361 | 53 | 52 | 1 | 1 | 83 | 482 | respiratory NADH dehydrogenase; respiratory NADH dehydrogenase 2; cupric reductase [Escherichia coli K12] |
| 260247 | 57 | 52 | 1 | 1 | 58 | 242 | negative response regulator of genes in aerobic pathways, (sensors, ArcB and CpxA); response regulator in two-component regulatory system with ArcB (or CpxA), regulates respiratory and fermentative metabolism (OmpR family) [Escherichia coli K12] |
| 191368 | 51 | 51 | 0 | 0 | 98 | 791 | orf, hypothetical protein; conserved protein [Escherichia coli K12] |
| 94076 | 51 | 51 | 0 | 0 | 226 | 516 | 2-octaprenylphenol hydroxylase of ubiquinone biosynthetic pathway [Escherichia coli K12] |
| 253170 | 51 | 51 | 0 | 0 | 51 | 381 | chorismate mutase-P and prephenate dehydratase; bifunctional: chorismate mutase P (N-terminal); prephenate dehydratase (C-terminal) [Escherichia coli K12] |
| 250809 | 51 | 51 | 0 | 0 | 128 | 340 | porphobilinogen deaminase = hydroxymethylbilane synthase; hydroxymethylbilane synthase (porphobilinogen deaminase) [Escherichia coli K12] |
| 178469 | 51 | 51 | 0 | 0 | 221 | 281 | tRNA pseudouridine 5S synthase [Escherichia coli K12] |
| 259421 | 51 | 51 | 0 | 0 | 51 | 274 | negative regulator for fad regulon, and positive activator of fabA; transcriptional regulator (positive regulator of fabB and fabA, negative regulator of fad), with acyl-CoA (GntR family) [Escherichia coli K12] |
| 180044 | 51 | 51 | 0 | 3 | 154 | 220 | orf, hypothetical protein; conserved protein [Escherichia coli K12] |
| 91086 | 51 | 51 | 0 | 1 | 291 | 182 | elongation factor P (EF-P) [Escherichia coli K12] |
| 258104 | 51 | 51 | 0 | 2 | 224 | 167 | peptidyl-prolyl cis-trans isomerase B (rotamase B) [Escherichia coli K12] |
| 260760 | 51 | 51 | 0 | 2 | 53 | 136 | transcriptional repressor of Zn transport system; transcriptional repressor of Zn transport system (Fur family) [Escherichia coli K12] |
| 251335 | 51 | 51 | 0 | 0 | 57 | 119 | orf, hypothetical protein; conserved hypothetical protein [Escherichia coli K12] |
| 221411 | 51 | 51 | 0 | 0 | 109 | 100 | t4064 30S ribosomal subunit protein S10 [Salmonella enterica subsp. enterica serovar Typhi Ty2] |
| 209358 | 51 | 51 | 0 | 1 | 78 | 61 | orf, hypothetical protein; conserved protein [Escherichia coli K12] |
| 257456 | 52 | 51 | 1 | 3 | 223 | 167 | RNase HI, degrades RNA of DNA-RNA hybrids, participates in DNA replication; RNase HI, degrades RNA of DNA-RNA hybrids [Escherichia coli K12] |
| 249724 | 55 | 51 | 1 | 0 | 136 | 695 | septum formation; penicillin-binding protein 3; peptidoglycan synthetase; division-specific transpeptidase, penicillin-binding protein 3 [Escherichia coli K12] |
| 219213 | 55 | 51 | 3 | 0 | 196 | 690 | cell elongation, e phase; peptidoglycan synthetase; penicillin-binding protein 2; cell elongation-specific transpeptidase of penicillin-binding protein 2 (peptidoglycan synthetase) [Escherichia coli K12] |
| 166308 | 59 | 51 | 1 | 0 | 215 | 424 | protein secretion, membrane protein; preprotein translocase, auxillary membrane component (General Secretory Pathway) [Escherichia coli K12] |
| 199586 | 50 | 50 | 0 | 0 | 50 | 844 | adenylate cyclase [Escherichia coli K12] |
| 180853 | 50 | 50 | 0 | 0 | 101 | 595 | UDP-N-acetylmuramate--alanine ligase [Vibrio cholerae O1 biovar eltor str. N16961] |
| 258178 | 50 | 50 | 0 | 0 | 133 | 543 | 3-octaprenyl-4-hydroxybenzoate decarboxylase [Escherichia coli K12] |
| 175434 | 50 | 50 | 0 | 0 | 225 | 533 | orf, hypothetical protein; transport protein of outer membrane lipoproteins (ABC superfamily, membrane) [Escherichia coli K12] |
| 239198 | 50 | 50 | 0 | 0 | 78 | 480 | electron transport complex protein; putative NADH dehydrogenase subunit/putative oxidoreductase [Escherichia coli K12] |
| 256463 | 50 | 50 | 0 | 3 | 201 | 408 | argininosuccinate lyase [Escherichia coli K12] |
| 179891 | 50 | 50 | 0 | 0 | 112 | 361 | putative GTP-binding factor; putative GTP-binding protein [Escherichia coli K12] |
| 164574 | 50 | 50 | 0 | 0 | 85 | 349 | DNA polymerase III, delta subunit; DNA polymerase III, delta subunit, probably ATP hydrolase [Escherichia coli K12] |
| 239582 | 50 | 50 | 0 | 0 | 57 | 283 | S-adenosylmethionine-dependent methyltransferase [Escherichia coli K12] |
| 252487 | 50 | 50 | 0 | 0 | 50 | 273 | putative enzymes; conserved hypothetical protein [Escherichia coli K12] |
| 254567 | 50 | 50 | 0 | 2 | 52 | 265 | probable hydroxyacylglutathione hydrolase; putative hydroxyacylglutathione hydrolase [Escherichia coli K12] |
| 258824 | 50 | 50 | 0 | 1 | 60 | 261 | diadenosine tetraphosphatase [Escherichia coli K12] |
| 171520 | 50 | 50 | 0 | 0 | 179 | 250 | flavokinase and FAD synthetase; bifunctional: flavokinase; FAD synthetase [Escherichia coli K12] |
| 251581 | 50 | 50 | 0 | 1 | 51 | 249 | putative ATP-binding protein of peptide transport system; peptide transport protein (ABC superfamily, atp_bind) [Escherichia coli K12] |
| 259473 | 50 | 50 | 0 | 2 | 128 | 216 | orf, hypothetical protein; conserved hypothetical protein [Escherichia coli K12] |
| 258512 | 50 | 50 | 0 | 0 | 70 | 215 | inner membrane protein, membrane-spanning, maintains integrity of cell envelope; tolerance to group A colicins; inner membrane protein required for outer membrane integrity, uptake of group A colicins and phage DNA [Escherichia coli K12] |
| 207669 | 50 | 50 | 0 | 0 | 50 | 212 | methyl-directed mismatch repair; methyl-directed mismatch repair protein [Escherichia coli K12] |
| 206603 | 50 | 50 | 0 | 0 | 70 | 212 | sigma cross-reacting protein 27A (SCRP-27A) [Escherichia coli K12] |
| 183047 | 50 | 50 | 0 | 2 | 180 | 203 | 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; 4-diphosphocytidyl-2C-methyl-D-erythritol kinase [Escherichia coli K12] |
| 173599 | 50 | 50 | 0 | 3 | 243 | 150 | orf, hypothetical protein; putative secreted protein [Escherichia coli K12] |
| 247316 | 50 | 50 | 0 | 0 | 50 | 142 | putative enzyme; conserved hypothetical protein [Escherichia coli K12] |
| 258901 | 50 | 50 | 0 | 0 | 147 | 137 | 30S ribosomal subunit protein S8, and regulator [Escherichia coli K12] |
| 204947 | 50 | 50 | 0 | 0 | 154 | 133 | orf, hypothetical protein; conserved hypothetical protein [Escherichia coli K12] |
| 165579 | 50 | 50 | 0 | 1 | 101 | 77 | cell division topological specificity factor, reverses MinC inhibition of ftsZ ring formation [Escherichia coli K12] |
| 235101 | 50 | 50 | 0 | 0 | 50 | 76 | orf, hypothetical protein; conserved hypothetical protein [Escherichia coli K12] |
| 255585 | 52 | 50 | 1 | 0 | 52 | 437 | putative peptidase; aminopeptidase B, a cysteinylglycinase [Escherichia coli K12] |